Thursday, October 22, 2026

The fingerprints of an intelligent mind are all over the genomes of life

 



 

“There are different categories of pseudoscience, but the type relevant

to Darwinism occurs when a legitimate scientific theory makes predictions critical to that theory that are subsequently falsified, but the theory continues to be promoted as science, often with creative story-telling and the use of technical terms mixed with words and phrases such as “over time,” “is conceivable,” “probably”

and many others which can be described charitably as words and phrases one uses when confirming data is unavailable”.

 

Kirk Durston

 

 

Apparently certain Christians, as well as certain scientists, so determined to ‘prove’ their agenda-driven arguments, will actually resort to lying to ‘make good their case’, or to ‘save the appearances’.

 

In the case of Creationists, for instance, Geology professor Ian Plimer has exposed such desperate falsifying in his book, Telling lies for God: Reason vs creationism (Random House Australia, 1994).

 

I (Damien Mackey) wrote about this unhappy situation, for example, in my article:

 

Abandonment of common sense, telling lies for God, not necessary prerequisites for biblical interpretation

 

(11) Abandonment of common sense, telling lies for God, not necessary prerequisites for biblical interpretation

 

One review of professor Plimer’s book reads as follows:

Telling Lies For God by Ian Plimer - 9780091828523

 

A powerful and controversial analysis of creationism - the belief that the Biblical description of the earth, and all life on it, can be applied literally - and an attack on the arguments put forward in its support. Ian Plimer, Professor of Geology at the University of Melbourne, examines in detail the arguments of the creationists, and draws on his own scientific background and the expertise of many of his academic peers to refute them point by point.

 

He details the implications of treating the Old Testament as a scientific text - and takes an equally searching look at the material used to back up the more unusual statements made by some creationists here and overseas.

 

This is an issue which arouses great argument and passion amongst many Australians. We are all entitled to our beliefs - but in a pluralist society we should also expect them to be subject to public scrutiny.

 

Kirk Durston (2025) will tell of how the same situation can occur with Darwinian scientists: Darwinism as Pseudoscience | Science and Culture Today

 

How Darwinism Became a Pseudoscience

 

Evolutionary biologist Bret Weinstein has a reputation for some pretty wild ideas outside his area of expertise that I might not want to defend. But when it comes to some comments he made a few months ago, within his own field of expertise, he was spot on when he provided a disturbing reality check on the current state of Darwinism. As a scientist, I have my own reasons why this is so. He stated,

 

In my opinion, the mainstream Darwinists are telling a kind of lie about how much we know and what remains to be understood … I think modern Darwinism is broken. Yes, I do think I know more or less how to fix it. I’m annoyed at my colleagues for, I think, lying to themselves about the state of modern Darwinism. I think I know why that happened. I think they were concerned that a Creationist worldview was always a threat … and so they pretended that Darwinism was a more complete explanation, as it was presented, than it ever was ….

 

As a biophysicist specializing in the information encoded in the DNA of protein-coding genes, and how that information prescribes the 3D structure of proteins, I have my own reasons for agreeing with Weinstein on this issue. Although he thinks he knows “more or less how to fix it,” my knowledge of the extreme difficulty (a colossal understatement) of locating sequences that will code for a functional protein with a stable 3D structure, tells me that neither he nor anyone else is going to fix it (although I would be fascinated to hear his proposed solution).

 

That said, there are some phrases in his statement that deserve to be pointed out: “telling a kind of lie,” “broken,” and “lying to themselves.” Note, also, the motive for promoting this broken theory.

 

To be clear, I am not suggesting that Darwinists are conspiring to deliberately corrupt science and mislead people, although such corruption and misleading is certainly happening. Rather, scientists who should know better, but continue to promote Darwinism, are living in denial, motivated by their own a priori commitment to materialism and scientism driven by an antagonism against any possibility that there is an intelligent mind behind the software encoded in the genomes of life.

 

Three Predictions of Darwinian Evolution

 

About 35 years earlier, I sat in the office of a professor of evolutionary biology at a major Canadian university. I had noticed three predictions of Darwinian evolution that appeared to be consistently falsified by experimental evidence, so I asked him about it. To my shock, he admitted that all three were major problems for which we had not yet found satisfactory answers. Keep in mind that this was 35 years before Bret Weinstein’s interview.

 

The main difference between then and now is that advances in science have made the problems even more obvious.

 

Eugene Koonin, an internationally recognized evolutionary biologist, published a paper in 2007 admitting that even RNA replication, a proposed stepping stone to life, was so impossibly improbable, that it was unlikely to occur anywhere in the universe. …. His solution was to propose an infinite multiverse, which would offer an infinite number of opportunities to solve this problem. It is especially interesting to read the reviewers’ comments. They expressed the fear that intelligent design might be seen as a better explanation for the origin of life. Consequently, the concluding sentence of Eugene Koonin’s paper absurdly states that his hypothesis of an infinite multiverse “leaves no room whatsoever for any form of intelligent design.” One might think that a mind, which we know exists given that we all have one, might be a better “Ockham’s Razor” option than proposing an infinite number of untestable universes … but rational deliberation is often sidestepped in pseudoscience.

 

If one wonders what the driving force behind Darwinism is, and what the motive might be for Darwinists to be “telling a kind of lie,” as Weinstein puts it, one might want to think about both Koonin’s denial of any kind of intelligent design behind life, and what Weinstein said about the so-called “threat” of the theory of intelligent design as an explanation for the origin and diversity of life. This “threat” and denial have resulted in Darwinists lying to themselves and the public. The result is that Darwinism has degenerated into pseudoscience.

 

Variation vs Darwinism

 

The average person tends to understand the word “evolution” as the theory that the full diversity of plant and animal life has descended from a very simple cell that somehow arose in the past and began to self-replicate. People are often confused to learn that evolution is often defined as variation in a population of plants or animals over time, via a combination of genetic drift, mutations … and natural selection. (Note: In this article, “mutation” includes insertions, deletions, duplications, inversions, and translocations.) Since we observe variation throughout nature, a Darwinist can look you in the eye and confidently state that “evolution is a fact!” But defining evolution as simply genetic variation over time is misleading. To avoid using the term “evolution” in a misleading way, I will refer to variation within a population over time as, simply, variation. As for the neo-Darwinian theory of common descent, we will describe that belief as Darwinism.

 

How Can We Tell the Difference?

 

Unfortunately, there is a disturbing lack of rigor in evolutionary biology when it comes to distinguishing between variation and Darwinism. I often observe Darwinists insisting that the two are the same thing, but as science advances this belief has become obviously false. Rigor must be an essential component of good science and using the word “evolution” to refer to two very different concepts is no exception. There is, in fact, a central, objective quantification of genetic change that allows science to clearly distinguish between variation and Darwinism. Absolutely central to life and its survival, reproduction, and variation, is the functional information encoded in the DNA of organisms. 

 

Functional Information

 

The concept of functional information as required by biological life was first proposed by Jack Szostak in a short article in the science journal Nature in 2003. …. 

Four years later, he coauthored a more extensive technical article in PNAS with Robert Hazen et al. further defining functional information. …. That same year I published an article in TBMM laying out how we can estimate the amount of functional information from actual data for protein families. …. I used a more complete equation than Hazen et al. used, but for the general cases they discussed, the equation I used reduces to the identical one they proposed. To confirm this, I contacted both Robert Hazen and Jack Szostak directly, showing them the derivation of their equation from the more extensive one I used for protein families, and they each confirmed that I was correct and that we are all using the same general equation for measuring functional information. ….

 

The Difference Between Variation and Darwinism

 

When we quantify the observed change in functional information in genetic variation within a population over time, we observe that there is none. If there is any change, it is usually a loss of information if the deleterious mutations are not compensated for at the same rate as beneficial mutations. A statistically significant increase in functional information has never been documented. 

 

Darwinism requires novel protein families and gene regulation systems, all of which require enormous increases in the functional information encoded in the DNA of the new type of plant or animal. Some Darwinists will point to the gain of a new function as positive evidence for Darwinism; however, when the functional information required for these gains is calculated, it turns out that a gain of function can occur without any increase in functional information. Therefore, gain of function fails to correlate with whether or not there has been a corresponding gain of functional information. 

 

To summarize, functional information is the key distinguishing factor between variation and Darwinism — the latter requires significant levels of new, protein-coding information, while variation within a population over time does not.

 

Categories of Pseudoscience

 

There are different categories of pseudoscience, but the type relevant to Darwinism occurs when a legitimate scientific theory makes predictions critical to that theory that are subsequently falsified, but the theory continues to be promoted as science, often with creative story-telling and the use of technical terms mixed with words and phrases such as “over time,” “is conceivable,” “probably” and many others which can be described charitably as words and phrases one uses when confirming data is unavailable. Those scientists who promote this sort of pseudoscience are “telling a kind of lie” to themselves and to the public. Once you start to see this, you cannot unsee it. Much of the origin of life literature is rife with it.

 

Critical Predictions

 

For the scientific method, a theory should be testable by making predictions which can be potentially falsified. A critical prediction is one that, if that prediction is falsified, the entire theory collapses.

 

One can find data that can be interpreted as “evidence” for virtually any belief or theory. Evidence in favor of a theory, however, is trumped by falsification of a critical prediction. 

 

As in any theory, one can find evidence supporting Darwinism, which textbooks dealing with Darwinism cover extensively, while at the same time completely ignoring or glossing over the critical predictions and their falsification. In this way, scientists “are telling a kind of lie about how much we know and what remains to be understood.” Emphasizing the evidence that supports a belief, while glossing over or ignoring the evidence that falsifies it, is another characteristic of pseudoscience.

 

For example, some aspects of the fossil record, phylogenetic trees, and genetic similarities can be interpreted in a way that supports Darwinism. However, the same observations are also predicted by the theory that there is an intelligent mind behind the software of life. In science, falsification of critical predictions entails that the evidence was misapplied. Due to creative storytelling, the line between science and science fiction has been blurred in Darwinism to the point of being almost indistinguishable. What we need for a critical prediction is something that is both essential and unique to the theory such that if it is falsified, we are forced to declare that Darwinism is, in fact, broken, as Weinstein might put it. Falsification exposes the creative storytelling of Darwinism for what it is — “telling a kind of lie.”

….

 

Summary

 

For Darwinism to be true, nature must provide an arena where novel, functional, stable, 3D proteins are relatively easy to find, and the rate of production of novel functional information encoded in the genomes of life is greater than the rate of destruction.

The reality is that neither is true. The laws of physics determine that stable 3D protein structures are unimaginably rare and the natural process of mutation leads to a net deterioration of whatever functional information is already out there. This is why every selective breeding experiment hits a limit if we try to see how far we can go. Nature ensures that the two critical predictions of Darwinism will continue to be thoroughly and consistently falsified. 

 

Darwinism began as a fascinating theory, but the falsification of its critical predictions means that those who continue to promote it are promoting a pseudoscience. They are, as Weinstein put it “lying to themselves” and “telling a kind of lie” to the public.

 

Ending on a Positive Note 

 

As Weinstein stated, “modern Darwinism is broken.” I am often asked what I have to offer as an alternative. My response is that we should go where the science points. In this case, the science shows that protein-coding genes require an impressive level of functional information, which is already encoded in the genomes of life. The only thing science has ever observed that can produce functional information are minds; we do it every time we message someone, write an essay, or write computer code. The fingerprints of an intelligent mind are all over the genomes of life in the form of the functional information encoded in the DNA. Science has no other observable, repeatable option; to ignore this is bad science. The ability to produce statistically significant levels of functional information is unique to intelligent minds. The key word here is “unique”; no other such process has ever been observed by science. Even genetic algorithms require an intelligent mind to design the fitness function and are, thus, examples of intelligent design in action. I have written a short introductory article, “Why This Scientist Believes that Intelligent Design Was Required for Biological Life,” presenting a positive, scientific method to test the hypothesis that the functional information found in life requires an intelligent mind. The job of science is to reverse engineer20 the cell with its information-processing and gene-regulatory systems to understand how it all works. ….

 

22nd October, 2026

Feast-day of pope-saint John Paul II ‘the Great’

 

 

 

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